I don't see any reason the flat top piston should be any tighter than the stock one. Hone the cylinder until you get a nice consistant cross hatch pattern on the whole thing. Assuming the cylinder bore is not in bad shape, this should be pretty easy, with a minimal amount of honing. Use plenty of oil, a slow drill speed, and don't over do it. If you pull the hone to far back while it's turning, the three arms are going to fly out. We used to use a Flex Hone "dingleberry" hone instead of the three legged spring loaded ones. I thought they were easier to use, and did a nice job, but you have to have the right size.
I'm planning on getting the 3 arm hone as I can get one for like 15 bucks from a local harbor frieght.
So I should use oil when I hone it ? If so what would you recommend?
And then I'm going to plastigauge the rod clearance before install. And use Lucas for assembly lube.